rs30365293 SNP Detail

Summary

• ID
  rs30365293
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108423396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATAGCAGT CACATGCTTC TGTGGGCTGA AGCTCAGCGA
  AGTGACACTT TCACCCCATG TGGTCTTGAC TGGGGCTGAA TTCATCAGGA AGTTGGGACT
  R
  GAGTCGTCAG CATGGCCACT TGTTTGGCTG TGAGGGTTGG TTCTCAGCTT GAGCTGGAGG
  GTACTGGTTT TCGGTATGTG GGGCGCTTCT TTCTATAAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45923296	mCV23380962	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss133502577	ENSMUSSNP3059768	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30365293					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108423396 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636107	regulatory region 636107	1045 bp distal
Rr636108	regulatory region 636108	479 bp proximal
Rr636109	regulatory region 636109	825 bp proximal