rs30362636 SNP Detail

Summary

• ID
  rs30362636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:50753154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGGGATT TCTGGTTCAG
  GATGGCTGAA GCCCAGTGGG TCCTGTGACT CTGGCTTTCT GATGCAAGGG CCATCTGAGT
  TCATTTTGAG ATGCTGAGAC CAACCCCTAT CCATTCAGAA GCCATTCGGT GTCCCTTCTT
  CAATTAGTTC CTTATCGTGG GGCTGCTGAA AGCATTGTGA GTATCCAGAG ATGAATTAAT
  R
  AGGGCTGAAA AGATCCAGAG ATAGTTACAT GCAAAGATGA AAAGGGCCCA TTAGAATATC
  GGGATAAATA AAATCTGCCC TCCGCCCATT TCAGAAGACT TAATGGAACG TCGCAAAGTG
  TTCAGAAGGA GTTGTTCTGA GGCCTGGAGG GAGGCAGACA CCGCCATTCC TGTCTGATAC
  TTGGGGCTGT AGCTGCTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45921208	mCV22334777	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss133184540	ENSMUSSNP380504	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30362636					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50753154 () rs orientation: forward

Symbol	Name	Function Class
C530044C16Rik	RIKEN cDNA C530044C16 gene	within coordinates
Rr543	regulatory region 543	within coordinates
Rr630065	regulatory region 630065	within coordinates
Rr630066	regulatory region 630066	106 bp proximal