rs30361286 SNP Detail

Summary

• ID
  rs30361286
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119832582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTGCAAGT TTTCAATATT ATATTCTCTT TTCTATGGGG
  AGGCACCCAG GGAGATCAGA TCTCAAGCCA ACAATATGTC ATCAGATCTC CTGGATTACT
  M
  TTCATGAATA AAATCCCCCT TAAGCATCGT TCCTGGAAAT AGGGCAAGTG ACTCATTAGG
  AGCTATGCTC ATTACAGAAT CAGACTGTAT GGTACAGTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45922487	mCV24679786	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss133593620	ENSMUSSNP5044963	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321929505	CHEV_6_119805639	CHEVERUD	SCREENING_POP	f	SNP						C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30361286					SNP	C	C	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119832582 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	469 bp downstream
Rr637739	regulatory region 637739	1017 bp distal
Rr637740	regulatory region 637740	within coordinates