rs30360906 SNP Detail

Summary

• ID
  rs30360906
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90335882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTCAAGTCC CGCTGCCAAC GTAGGGATCT CACTTCTCTG ATGGAATCAG AAAGTGTCAT
  TTCTTTGCAA TCCCTGCCCT AGGCATGGAT GAGAATTCAG TGCTAGAGAG TGTAGCTGTA
  GTGAAGGATA ATAGGTACAG CTGGACTTTG TCCATTTCTC CTGCTTCCTC TGTTTCTAGA
  CTCCCCTGTC TCTGTTCCCC CACTTCCCTG ACACATTGTT CTTCAGTCCC AAGAATTAGC
  ATAAGCCTGG CCCTCAGCAC GACCTAGTGC AAGGAATGAT GGCACACGCT TCCCTTTTTC
  W
  GTAGACATGG CCGTGCAGAA CTTCGTGGGA GATGCCTGTC GTGGTGCCAC CTGGGTTGCA
  CTTCACAATG GAGGGGGTGT AGGCTGGTAA GAAGACATCA GAAAGCAGGC TGTGGGCTGA
  TATGGAGAAC ATGCGGTCCT CTTGGGGCAG GGGCAGGTCT GGGGGCCTGC AGTTCTCGGA
  CTTAGGTCTC TGACCACTTG TTCTATTGAG GGCTTTGTGT GAATACATTC CTCATGTGAG
  CTGAGAACCA GGGGTCGGTA TGTTGGGGTA CAGAAGATGG AGGGACAGAA AGGGAGACTT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45920987	mCV23962469	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30360906					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90335882 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr634185	regulatory region 634185			569 bp proximal
Rr634186	regulatory region 634186			1039 bp proximal
Uroc1	urocanase domain containing 1			Intron
				Splice-Site