rs30357711 SNP Detail

Summary

• ID
  rs30357711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52707281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGGATGAG ATTAAAGTGC
  GTTGTTATTC TGGCTGAAAG AACTCTCCCG TGAAAGAGCG CACACTCTAA GATCCTAACT
  CTAAAAAGCC CTGGGAAAGG CAAACTAATC CCTGGTGGCA GAACCAGGGT AGAGGCTGCT
  CTTCCAGGTG TGAGGAGATA GGACTGACTG GGAGGGACTC CATGGGAATT TCTTAAGCAG
  R
  AGAAGAACGT TCTATTTCTT GACAAGGATG CGGATTATGT GGGAGGTAAG CATTGCCAGA
  ACTTATTGAT AGTATGGAGT TAAGATCTAC AGATTTTTAT TGTATAGAAT ATAAGTTATG
  TATACTACAT TGAGGTATCC ATTATACCAC AATAAAATTT TAGAAGTTTC ATAAATCGTT
  TGTAATGACG GATTTGTATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45421062	mCV22816792	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss135178441	ENSMUSSNP6137051	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss320765236	CHEV_3_52603782	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30357711					SNP	G	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52707281 () rs orientation: forward

Symbol	Name	Function Class
Rr576585	regulatory region 576585	1723 bp distal
Rr576586	regulatory region 576586	770 bp proximal