rs30356940 SNP Detail

Summary

• ID
  rs30356940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:55571712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCCCAGCAT CAGGAGGCAG AGGCAGATGG ATTTCTATGA
  GTTCCAGGTC AGAATGGTCT CTACATAGAA AGTTCTGGGT CATTCAGGAT TACAGAGTGA
  R
  ACCTTATCTC AAAAAGCAAA AACCAAACCA AACCAAACCA AACCAAACCA AACCAAACCA
  AAACAACAAC AAAAAACCAG TTGGTTGGTT GAAAAAGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45421250	mCV22826314	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135189425	ENSMUSSNP7224095	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30356940					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:55571712 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nbea	neurobeachin			Intron
				Noncoding-Transcript-Variant
Rr576987	regulatory region 576987			1812 bp distal