rs30355625 SNP Detail

Summary

• ID
  rs30355625
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131745052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGG TCCTATGGTG GACATCTTAT
  K
  TCAGTGCCAT GAACTAATAT GGATA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45421432	mCV23620709	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss46972777	NES10887764	PERLEGEN	MM_PANEL2	f	SNP		T	T	G		T		G	T	T	T
ss135907988	ENSMUSSNP5242805	ENSEMBL	ENSEMBL_Sanger	f	SNP		T			T
ss320968406	CHEV_3_131702255	CHEVERUD	SCREENING_POP	f	SNP							G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30355625					SNP	G	T	T	G	T	T	G	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46972777	NES10887764	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131745052 () rs orientation: forward

Symbol	Name	Function Class
Gm29949	predicted gene, 29949	within coordinates
Gm64577	predicted gene, 64577	within coordinates
Rr585407	regulatory region 585407	1200 bp distal