rs30355320 SNP Detail

Summary

• ID
  rs30355320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121079824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTTCCAT CTCCTTTCTT
  TGATTGCTCA GTCTCCTCTC CTCCACTAAG TGGCAGCAAC CCCAGACAGA CTCTTCTTTA
  TCCAGGACTG CGGTGGTGAA TATTGGTTGT CAGCTTGACA GCACCTAGAA TCCCTTAGAA
  ATGAGCGTGA CTATGGTGTC AGTTAGGTTA GATGGAAAGA TTCACCAAAA CTGTGGGTGC
  Y
  ACCGTTTCAC AGATTTAGTC CCAGACCAGA TAAACAGAGG AAAGTGAGCT GAGAACTGCG
  AATGCGACGT GACCACGTAC CTCACGCTCC TAGCATGCTT TCCCTACCAT CATCGACTGT
  TCCCTCAGAC TGCAAGCCAG AGTAAACTCT TCCTTCCTTA AGTTGTGTTT ATCAGGTATT
  GTGCCATAGC AGTGAGGGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45421332	mCV23993552	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs30355320					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121079824 () rs orientation: forward

Symbol	Name	Function Class
Rr375663	regulatory region 375663	1552 bp upstream
Rr584034	regulatory region 584034	508 bp distal
Rr584035	regulatory region 584035	303 bp proximal
Rr584036	regulatory region 584036	856 bp proximal
Rr584037	regulatory region 584037	1189 bp proximal