rs30353469 SNP Detail

Summary

• ID
  rs30353469
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143656124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTTCAACTTA TCTAGATCTT AAACCCTTTT TTGAGCAGCT TCCTGTTGCC CAGAGCAGTC
  CTAGCAAAGA TGGCGGCATT TCCATCTGTA GCTAAGATGA AAGGCACTTC TCTCTTTTGA
  CTTACTGATT AGATGTGCAT TAGTTTCATG ACCTTCTATA ACAAATTTTT ACAAGCTTTG
  TGGCCTCACA GAATCTTTTA TCTTAGTTCT GAAGACTACA AGGTGCTCAT AATGCCCTGA
  ATTAATCAAA CAGTCCAGGA GAAATGTTTT GAGAGCCGCA GTTGACCCAC ACAACAAGGC
  R
  ATAATCAGCG GTGTTGGTTC TTTAATCCAG CACATCACTT CCGAAAGGGT GTTCTGCTGA
  GCACTGGGCC CTGGGGATTC TTTAGATTTT AAAAATATAG GGGTTAGGAT TAAGGTGTTC
  TAGAGTCAAA TGAGTTTGGA AAATCTGAAC TCCTCCTTGG GGTGTCACAA ATCACAGTAG
  TTCAGTAAAG ATTTGATCTG ACACATGCTT GGGAAGCTGT TTAACTTTGT CAGATTCATT
  GTTTTTCCAA ACATAATTGA CCAAAACAGA GTAATGAAAG GAAGAAGGAG AAGGAGAGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45419622	mCV22812364	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss136027360	ENSMUSSNP3622377	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30353469					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143656124 () rs orientation: forward

Symbol	Name	Function Class
Rr406686	regulatory region 406686	1877 bp distal
Rr586569	regulatory region 586569	284 bp distal