rs30351682 SNP Detail

Summary

• ID
  rs30351682
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14953755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA TGGAGACCCA GTCCCATTTA
  S
  ACACAGTGGC TGCCTTTACG GCCTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45419243	mCV23564263	ABI	CRAMUS_MOUSE	f	SNP	C	C
ss134618324	ENSMUSSNP5918451	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320667964	CHEV_3_14888695	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30351682					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14953755 () rs orientation: forward

Symbol	Name	Function Class
Car2	carbonic anhydrase 2	Intron
Cpgi12992	CpG island 12992	1481 bp distal
Rr573724	regulatory region 573724	1121 bp distal
Rr573726	regulatory region 573726	1505 bp distal
Rr573727	regulatory region 573727	1452 bp distal
Rr573728	regulatory region 573728	1270 bp distal
Rr573729	regulatory region 573729	within coordinates
Rr573730	regulatory region 573730	374 bp proximal
Tssr832	transcription start site region 832	1974 bp downstream
Tssr28466	transcription start site region 28466	1995 bp downstream
Tssr28467	transcription start site region 28467	1836 bp downstream
Tssr28468	transcription start site region 28468	1279 bp downstream