rs30337864 SNP Detail

Summary

• ID
  rs30337864
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:67040794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA GTATCTATAG TAAAGTGCAG
  R
  CAGAATATAA TAAGCCATTT AACTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss45099165	mCV23036105	ABI	CRAMUS_MOUSE	f	SNP	G	G			A	G
ss47438744	NES11025279	PERLEGEN	MM_PANEL2	f	SNP			G	A				G	A	G
ss144529234	ENSMUSSNP3959034	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G				G
ss319760333	CHEV_1_67048209	CHEVERUD	SCREENING_POP	f	SNP							G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs30337864					SNP	G	G	G	A	A	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47438744	NES11025279	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:67040794 () rs orientation: forward

Symbol	Name	Function Class
Lancl1	LanC (bacterial lantibiotic synthetase component C)-like 1	mRNA-UTR
Rr412496	regulatory region 412496	580 bp distal
Rr412497	regulatory region 412497	614 bp proximal