rs30329139 SNP Detail

Summary

• ID
  rs30329139
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90336016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAGCATAA GCCTGGCCCT
  CAGCACGACC TAGTGCAAGG AATGATGGCA CACGCTTCCC TTTTTCTGTA GACATGGCCG
  TGCAGAACTT CGTGGGAGAT GCCTGTCGTG GTGCCACCTG GGTTGCACTT CACAATGGAG
  GGGGTGTAGG CTGGTAAGAA GACATCAGAA AGCAGGCTGT GGGCTGATAT GGAGAACATG
  S
  GGTCCTCTTG GGGCAGGGGC AGGTCTGGGG GCCTGCAGTT CTCGGACTTA GGTCTCTGAC
  CACTTGTTCT ATTGAGGGCT TTGTGTGAAT ACATTCCTCA TGTGAGCTGA GAACCAGGGG
  TCGGTATGTT GGGGTACAGA AGATGGAGGG ACAGAAAGGG AGACTTGCAT AAAGCAACTC
  CAGAGTTTGG CCTGTACCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45918470	mCV23962471	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss133377472	ENSMUSSNP1347872	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30329139					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90336016 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	435 bp proximal
Rr634186	regulatory region 634186	905 bp proximal
Uroc1	urocanase domain containing 1	Intron