rs30323010 SNP Detail

Summary

• ID
  rs30323010
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124381413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGGCTAGA ATTCTCCAGA
  ATTCTCGTAA AATAAAGATT CCTCACTGGA GACTGAGGAA AGGAATGTAG ATAAGGTGGT
  GGTGTCTCTT TGGATCCAAT AACTCAAAGG ATTTTGCATA TTCATTTATA TGTGTAGCTA
  TAAAATCAGA GAATACTGTT TCAAGGCTGC CATCTTCTGG ATGATGCATA CCATTACAAC
  K
  CAGTTCACAT CTTGGTAATC TCTTCACAAA ACCACTGTGA CAATTATTTT CTACTTGATC
  TAAGCTTCAG GCTCCTGAAA ATATAATTAA ATATTTAACA GACCCGTGAA GAAGCAATAG
  TAAAAGGAAA GCTAATTGTG TGATTAAGCA TAATAAAAAC TACTAAGTAA TTAGATTAAG
  TGTCATTGTG TGCAAATTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46936761	NES10663319	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30323010					SNP	T	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46936761	NES10663319	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124381413 () rs orientation: forward

Symbol	Name	Function Class
Gm9379	predicted gene 9379	764 bp downstream
Rr584593	regulatory region 584593	1796 bp distal
Rr584594	regulatory region 584594	within coordinates
Rr584595	regulatory region 584595	16 bp distal