rs30323007 SNP Detail

Summary

• ID
  rs30323007
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124381348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAGGAAT CTAAGGCAAA
  ATAAGAACTC AGTAAAAAAA TGTTACTTGT ATACATATTT CTGCTGCAGG CTAGAATTCT
  CCAGAATTCT CGTAAAATAA AGATTCCTCA CTGGAGACTG AGGAAAGGAA TGTAGATAAG
  GTGGTGGTGT CTCTTTGGAT CCAATAACTC AAAGGATTTT GCATATTCAT TTATATGTGT
  M
  GCTATAAAAT CAGAGAATAC TGTTTCAAGG CTGCCATCTT CTGGATGATG CATACCATTA
  CAACGCAGTT CACATCTTGG TAATCTCTTC ACAAAACCAC TGTGACAATT ATTTTCTACT
  TGATCTAAGC TTCAGGCTCC TGAAAATATA ATTAAATATT TAACAGACCC GTGAAGAAGC
  AATAGTAAAA GGAAAGCTAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss46936758	NES10663318	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs30323007					SNP	A	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46936758	NES10663318	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124381348 () rs orientation: forward

Symbol	Name	Function Class
Gm9379	predicted gene 9379	829 bp downstream
Rr584593	regulatory region 584593	1731 bp distal
Rr584594	regulatory region 584594	within coordinates
Rr584595	regulatory region 584595	28 bp proximal