AGATTTCTCT TCTAAGTAAG GAAGAAAAAA TAGCATTCAC GTTCTCAAAC CTGGTCGACA TGAACTGGTG TATGTGAGCT TCTAGATCAG CTTCAAAGTT AGTACTGTTT CAGCACGCTT CCTCCTGCTT AGAGCTCAGA CCTCTCTCTA CTCGAGGTAG TAAACGGGGA GAAGAGGAGG ATAAGGGCAT AAAATAGATG Y GATACTGAAA TGACAAACTA TTATGTGAAG CGTCACAGCT TCTGGTCTGA ATGGCTTCTC TAAATATGTA GAGGTTCATT GAGCTTATGG TCTGATTCCT GGATTTGATT AATTTCAGTG TGTGACTTTT TTTTTTCAAG AATTGAAGAT TATTGATATT TTTGCAAACT ATTTTTTATC CGACCCAGTA ATCATTTTCA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46935965 | NES10817343 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs30321012 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46935965 | NES10817343 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr3:52936946 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr576621 | regulatory region 576621 | 708 bp distal | ||||||
Rr576622 | regulatory region 576622 | 14 bp distal | ||||||
Rr576623 | regulatory region 576623 | 287 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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