AGAGAGATTG AGTCTGTCTT TGGCTGAACA CTGAAGTCCT TGATAGACCT GCAAAGTACC CTATCCATTA CTCTTCCTCC AGGAAAGATT TCTCTTCTAA GTAAGGAAGA AAAAATAGCA TTCACGTTCT CAAACCTGGT CGACATGAAC TGGTGTATGT GAGCTTCTAG ATCAGCTTCA AAGTTAGTAC TGTTTCAGCA S GCTTCCTCCT GCTTAGAGCT CAGACCTCTC TCTACTCGAG GTAGTAAACG GGGAGAAGAG GAGGATAAGG GCATAAAATA GATGCGATAC TGAAATGACA AACTATTATG TGAAGCGTCA CAGCTTCTGG TCTGAATGGC TTCTCTAAAT ATGTAGAGGT TCATTGAGCT TATGGTCTGA TTCCTGGATT TGATTAATTT S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46935962 | NES10817341 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | G | C | C | C | G | C | C | G | ||
ss320766568 | CHEV_3_52833362 | CHEVERUD | SCREENING_POP | f | SNP | C | G | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
||||
rs30321009 | SNP | C | C | C | C | C | C | G | C | C | C | C | G | C | C | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46935962 | NES10817341 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr3:52936861 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr576621 | regulatory region 576621 | 623 bp distal | ||||||
Rr576622 | regulatory region 576622 | within coordinates | ||||||
Rr576623 | regulatory region 576623 | 202 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|