rs30317901 SNP Detail

Summary

• ID
  rs30317901
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8417416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTACAACA TAGCTGCTTT
  CACGTTTGTG CATATATGAA AATGCACAGT GTGAGCCAGC AAGATGGCAC AGTGGGTAAA
  GGCACTTGCT GCCACACTGG AAGACAGAAG TTTAGTCCCT GGAGACCACG TGATATTAGG
  AAAGAACTGA CCTCCACAAG TTGTCCTCTG ACCTACAAAA CACCGTGGCA TGTGTGTGTT
  Y
  CTGTTCATTC ATCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCACACA CACACACACA
  CACACACACA CACACGAAAT AAATAAACAT AAAAACTTTG TTTAAATGTA CAGCTTATAT
  TTACTAGTTA TAACGTTTTC AATTGTGAGG ACAAAGAAAA TGGGCCTTTT CCTTACTAAT
  CAATTGCCCT ATTTGTTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45918202	mCV23998869	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss132968462	ENSMUSSNP5110448	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30317901					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8417416 () rs orientation: forward

Symbol	Name	Function Class
1810015A16Rik	RIKEN cDNA 1810015A16 gene	1634 bp downstream
Gm45062	predicted gene 45062	Intron
Rr626392	regulatory region 626392	218 bp distal
Umad1	UMAP1-MVP12 associated (UMA) domain containing 1	Intron