rs30317588 SNP Detail

Summary

• ID
  rs30317588
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:56019544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTAAAGTT TGTAATTCGT
  GGTCTGTCCA CACTGATATA ACTTCAGGCT TCTCACTGCT AAGATTTAAC CTTTGGCTTC
  TGGACCTTTT TGGAGTCTTG CTTAATTTCC AGAAAGAAAA AAAATTTAAA TGGTCCATAT
  AAACTTTGCT AGGCTACTAC AAAGAATACC TGCAAAAGCA CTGGTAAGCA GCATCCAGGG
  R
  GGCCTGAAAC ATGGGATTGG AACTTGTCGG TAAGGCCATG TTCTTTATCC CATTGGTTGA
  AGGTAGCCTG CTGCTTGGGC TCTCCAGGGA AATGGCTGCC AGCAGGCACG GGTGGGAATC
  TGGTACGGGA TGGTTCAGAT TGAGTAGATT CTTTTGTTCC TCATCACACA TTTTGCCGTG
  GCAATGAAGC CAGATTCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45917534	mCV24833517	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss133220271	ENSMUSSNP5814849	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30317588					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:56019544 () rs orientation: forward

Symbol	Name	Function Class
Rr631042	regulatory region 631042	1714 bp proximal