rs30316731 SNP Detail

Summary

• ID
  rs30316731
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83544272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGACATT ATTATTGTTA
  TTATTCATGT GTGTGATATG TGTGTGTGTG TGTGTGTGTG TGTGTATGCA CGTGCATGCA
  GCCCTGCATG TGCCACAGTG CACATGTGGA GGTCAGAGGA CAGCTTGTGG AGTCAGTTCC
  ATCCTTCCTT CACGTGGGCT CCAGGGATTG AATACCATAC TTGCGTGACA AGTACTTTAC
  S
  CATAAGACAT CTCTCTAGCC TGCCATTAAA AAAATTTTTT TTAACTTGAA TTCCTCCCTT
  CTAATGTCTG AGGGAAAATG ATCATGAACA AGTATTTTTG TATAGAAACA GTTCACTCAG
  AAAGTCATGA GGACAGTCAA TAAAAGATGC ACTAAGGATC CTTATCTCAT ATTTTCTGGT
  TTCTGAAGTT AATCATGGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45915746	mCV22811858	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss133348372	ENSMUSSNP6081339	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30316731					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83544272 () rs orientation: forward

Symbol	Name	Function Class
Gm21284	predicted gene, 21284	749 bp upstream
Rr632893	regulatory region 632893	1680 bp proximal
Stambp	STAM binding protein	Intron