rs30315083 SNP Detail

Summary

• ID
  rs30315083
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:105614615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT CTGGTTCTTG CCCAGGAATG
  Y
  CTCATGCAAT TCTGATTAAG GTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45417564	mCV22876668	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss320863083	CHEV_3_105510217	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs30315083					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105614615 () rs orientation: forward

Symbol	Name	Function Class
Inka2	inka box actin regulator 2	Intron
Rr367522	regulatory region 367522	86 bp downstream
Rr582757	regulatory region 582757	1831 bp distal
Rr582758	regulatory region 582758	1430 bp distal
Rr582759	regulatory region 582759	305 bp distal
Rr582760	regulatory region 582760	333 bp proximal