rs30314223 SNP Detail

Summary

• ID
  rs30314223
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17752167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCCTTGGT ACTGGATAAT
  CAGTTGGTGT GCTCTTCCCT GGGGAAAACT GTTTCTCCAC TTCTCAGCCT TCCTTAGCTG
  CTTGCTGTTT AAACTTATGG ATGTACCACA GGATGCATAA GTCTTAGTGT GGCTTCTAAG
  TGTTTGCACC CATGTTTGTA CTAGAAGCAT CCCTACCTGG AAGGAGATAC AGAACATTTC
  W
  GTTTCCTCAG GAGGAATTAT GGCCTTCCGA TTCATTATTC TTGCCAAGTG ATAATTACCA
  TTCTGATTCG AGACTTCCCA GACTCATGTT AATGAATCTT TTAAATTTTC TTTCTTGCTT
  TCTTGTTTTT TACATATAAG ACAATGGAAC ACATCTGAAT TTTTAACTTG GTGAATATAT
  AGTTAAGTTG ATTTTATATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45915928	mCV22806930	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss133022007	ENSMUSSNP2980341	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs30314223					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17752167 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626854	regulatory region 626854			1338 bp distal
Rr626855	regulatory region 626855			487 bp distal
St7	suppression of tumorigenicity 7			Intron
				Noncoding-Transcript-Variant