rs30313863 SNP Detail

Summary

• ID
  rs30313863
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:50380477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGAATAAACT GCAATGTGTG ACTGAATTTG AAAAAAAAAG TCAGAATGGA AGGAGATAGA
  ATTTGAGAAT TCTGGATTGT GAAGCAAGTT CCTGTCTTTA GTCTGCAGAC TAGTAGCACC
  AAAGACGTGT GGGTCCAATC CCTAGACCCA CAACCATCCA TCTTAAATGG CAAAAGGGAC
  CTGGCAAGCA TGGTAATGAT AATCCCTGGA CATGGGAAGA CTGTTTCAGA CTATCCAGGC
  GGGCCCTACC TAAGCAAGAG GACCCTTTAA TGGGAAACAG GACGAGCATT AGCAATGTAA
  Y
  CACAGAAGCA GAGGAAAAAA ATTTGGAGTG ACTTGAGACC ATTAGCCAAG AACTGCAGTA
  GTCTTCCCAA GATGGAGAGA ACAGGGCGTG TGGTCCCTAT CAGAACCCCT GGGAGACACT
  GTTTTCCCCT TGCCGGCCCC TGGCTTTCAG CATCCGACTT CCAGAACTGA TCCATTACAG
  CACCAGTAGG GAATGAATGT ATTGCCTGTA TCATGTTTCA AGGGGGTAGG TGAATAAAAG
  TGTGAAACAA GGCAGGCAGA TTGCAAAGGC CAGCTTGGCC TACATAATAA AACATTAGTT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45917105	mCV27581316	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30313863					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:50380477 () rs orientation: forward

Symbol	Name	Function Class
Osbpl3	oxysterol binding protein-like 3	Intron
Rr630005	regulatory region 630005	1096 bp proximal
Tssr60914	transcription start site region 60914	1410 bp downstream