rs30312123 SNP Detail

Summary

• ID
  rs30312123
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7733357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCGTTAGA CAAGTGTTTC
  CTATCGAAAT TTACGTCCCT CAAGTCAGAA TGCCTTGCAT GAGACTGTGC AATAAAATCA
  CTGCCCACCA GGTGGCAGTC ATGGTACAGT AGCTCTCAAA GACTGGCGTT GATTGGGGAG
  TTGCTCAACG TTTAAACAGA GTTGCCATCT GACCCAGTAA TTCCATTCTT AGATTTATAC
  S
  CAGGAAAGTG TAAAACACAT GTCTATACAA AAACTTGTAC ATGAACGCTT GTGACTATTA
  ACGGTAGTCA AAATGTAAAG TACCCAGTGT CCAGACACTA AGAAGGCCAT AAACAAAATA
  TGGTATATAC AAAGGGAAGG GTGTTACTCA GCCACAAAAA TGAACAAAGT GCAGATTCAT
  GCTGCAGCAT ACATGAACAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45916494	mCV24779756	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
ss132954132	ENSMUSSNP5054811	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30312123					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7733357 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	901 bp distal
Rr626315	regulatory region 626315	within coordinates
Rr626316	regulatory region 626316	99 bp distal