rs30309637 SNP Detail

Summary

• ID
  rs30309637
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125098622 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTTTCTC CTTTTCTTCT
  GTGTTGATCT CTCTTCTCCC TCCAGTTTCC CCATTCCCCT CCACATCACT TCTTTCCTAT
  CATATCCTCC CTGCTGATTT GTTCCTCTGC CTCCCATGGT TTCTTCTACT TTTCTGGTTG
  CTGTGTTTTC TCCAGGTTCT ATGCTCACAT GTGAAGTGTT TATGCTAGAA ATCTTAGATG
  W
  GATTTTCTTC CAGGAATATT ACCTCTTTTA AAGAGTATCT TTGATTAAGT ATCTTTGAGA
  GTAGAGATAT ATTATTAAAC TAACAACTGC AATATATTAC TTAAACTAAC AAGCCATATG
  AAATATTTAT ACATTTTATG AAAATATTTT AACAACTCTG TTTAAATTAT AAAGTAAAGA
  TACTATGAAA TACATGTACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45416621	mCV24036731	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss320935437	CHEV_3_125007891	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30309637					SNP	T	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125098622 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	1768 bp proximal