rs30308922 SNP Detail

Summary

• ID
  rs30308922
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:53466792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA TGTGTTCTTC TCTGGTCAGC
  W
  TCCTGGCAGT GGTGCGCAGG GGTGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45415770	mCV25313725	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss135182223	ENSMUSSNP464402	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss320768781	CHEV_3_53363293	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30308922					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:53466792 () rs orientation: forward

Symbol	Name	Function Class
Frem2	Fras1 related extracellular matrix protein 2	Intron
Rr576716	regulatory region 576716	1552 bp distal
Rr576717	regulatory region 576717	1964 bp proximal
Tssr33271	transcription start site region 33271	1800 bp upstream