rs30308607 SNP Detail

Summary

• ID
  rs30308607
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66444268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAGACCCTT CTGGAAGCTC TCCTTGAAGC TGTTTGCTGT
  TCAGCTGCCT CACCAGATAT TCTGAGTCTA GGGGCGGGAA AGGAAATAGA ATTAAAAATC
  K
  ATCAGCGGCT TTTCGAATTG GCACAGTTCC ACTAGAAGCC TGAGTGGGGG AGGACTTTGG
  AAGGGAGGGC TTAATGAGGT GTTGTGATTG TTGGAGGTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39667704	mCV24983811	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T	G
ss147330807	ENSMUSSNP4326021	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			G
ss325660090	CHEV_18_66470851	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30308607					SNP	G	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66444268 () rs orientation: forward

Symbol	Name	Function Class
Gm15958	predicted gene 15958	within coordinates
Rr539711	regulatory region 539711	within coordinates
Rr539712	regulatory region 539712	1651 bp proximal
Rr539713	regulatory region 539713	1693 bp proximal