rs30307774 SNP Detail

Summary

• ID
  rs30307774
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38843308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGTGTGAA TTCTATGGAC CATAAACAAT CAAATATTGC
  TTGCTTTGAA TTAAACTCAG CAACAATTTC TAGAGGAAAA CTAAGCATAT CTTAATCTTT
  M
  TGAGGAATGT CTCACCATGG GTGAAATATT TCCATACGAA TTTTTTCCTT GTAATTTTTA
  ACTATTGGCT CTCCAGAGAT GTCTGGGACT ATTCAGGGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss45414856	mCV23005709	ABI	CRAMUS_MOUSE	f	SNP	A				C
ss60388734	NES15898911	PERLEGEN	MM_PANEL2	f	SNP		A	C	C		A	C	C		A	A	C		A
ss134844044	ENSMUSSNP5570358	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320723084	CHEV_3_38688081	CHEVERUD	SCREENING_POP	f	SNP									A				A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs30307774					SNP	A	A	C	C	C	A	C	C	A	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60388734	NES15898911	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38843308 () rs orientation: forward

Symbol	Name	Function Class
Rr575703	regulatory region 575703	77 bp distal