rs30305775 SNP Detail

Summary

• ID
  rs30305775
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:27778883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCACCTGGG AATGCAGCCA
  CTCCCTCCTC TCCCTCCCAG AGGCTGGCTG TGATTCAGCT CTAATTGCAA GTGGTGTTGT
  CTCGGATAGT GCGTGTAAGT AACCACAATA AACTCAGTTG TCCCCCAAGT TTGATGTTGG
  AGGAATCGTA CTTCGGTTTG TCTTTTGGTG CCCTTAACTG GTGTCAACAT TTGTTTCCTC
  R
  GGGAAAGAGT TCCCAGAGAC ACTGGGCAGG ACAACTCTGA ACAGACCAAT CAATGTTCAA
  TGGGGTCTGC CCTGGCAAAC CGTGCGTAGA ACTGTGTAGA CCTGATGCTT GCACTTCCAC
  GATATCTTCT GGTTAGCCTT GTCCTAGGTA CACAGATACA AGTTACAACC AAGCTTCTCA
  CCTTGGAGAG ATTCTATGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45416507	mCV25204351	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss134706709	ENSMUSSNP3263164	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30305775					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27778883 () rs orientation: forward

Symbol	Name	Function Class
Rr574477	regulatory region 574477	107 bp distal
Rr574478	regulatory region 574478	1047 bp proximal