rs30303757 SNP Detail

Summary

• ID
  rs30303757
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87665153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA AGCTGCTTGG CTGGTACCCA
  R
  CAGAGCTGAA CTAAGATCTC AGTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45415799	mCV25326038	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss135468155	ENSMUSSNP4725546	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss320835384	CHEV_3_87561768	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30303757					SNP	A	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87665153 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi13335	CpG island 13335			994 bp distal
Pear1	platelet endothelial aggregation receptor 1			Intron
				mRNA-UTR
Rr579538	regulatory region 579538			1705 bp distal