rs30294507 SNP Detail

Summary

• ID
  rs30294507
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14296237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG TGAACAATAG CTTTCATGTA
  K
  GCACTAAGCG TCCACTGTGT GCCAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39171154	mCV25068762	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	T
ss138987226	ENSMUSSNP3173968	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30294507					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14296237 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6157	CpG island 6157	98 bp proximal
Pdhb	pyruvate dehydrogenase (lipoamide) beta	511 bp upstream
Rr389295	regulatory region 389295	within coordinates
Rr487855	regulatory region 487855	1198 bp distal
Rr487856	regulatory region 487856	409 bp distal
Rr487857	regulatory region 487857	290 bp distal
Rr487858	regulatory region 487858	21 bp proximal
Tssr127398	transcription start site region 127398	559 bp upstream
Tssr127399	transcription start site region 127399	533 bp upstream