rs30271584 SNP Detail

Summary

• ID
  rs30271584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121570621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAAACTCAT TTTTAGTTTA AAACACAGTA TAAAGATTTG
  CTATTTAAAA TATATCTTTA GCATTATTCA TCCACATGTA AAGGCAGAGA AACCCGCGTG
  R
  CCGCCCGTCC AGTGTTTATC TTACCAGTTT TCGGAAGACT GAGTGGATTG TCTGCTTCTC
  CCGTTTATTC CCATTGTAAA AGGCAATTTC TTCACTATTA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46930749	NES10687582	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	G	G	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30271584					SNP	A	G	A	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46930749	NES10687582	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121570621 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	936 bp proximal
Rr584167	regulatory region 584167	1234 bp proximal
Rr584168	regulatory region 584168	1580 bp proximal