rs30270040 SNP Detail

Summary

• ID
  rs30270040
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83749478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCACCACT AGCCCTGTGG
  GGATGGAGAG TCCGGTCACA GTGTGCTCAC CAAATCCAGA AGGCCCCAAA ACTGGAGCCC
  CAGGTCTCAG TCTTGACTCT ACACCAACCC ACAGCATGGC TCTGGGCCAA GGGCACTGCC
  TAGACCCCAG TCCCCATCTG TTAAGGACAG GTGCTCAGCT CCAACTTCCT CACTGCGGAC
  R
  GCAGCAGCAA CAGAATCAGA AGGTAGACTG GAACATTCCG GCATGTTATA AAAACAAGGT
  TTGCTTTGTG TTACAAATAA CCCATGATCA GGCCACTGCT CTCCCAAGAG CCAGGTTGGA
  GACGAGATCA TGAGTAGGCA GAACACACAC CTCAGTGGAA TGTGCTTCAT ACTGCACAGC
  AGGGAGAAGG CCTCAGATAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45912061	mCV24606527	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30270040					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83749478 () rs orientation: forward

Symbol	Name	Function Class
Rr632937	regulatory region 632937	1750 bp proximal
Tex261	testis expressed gene 261	Intron