rs30269893 SNP Detail

Summary

• ID
  rs30269893
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89263026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGGG TCCCTGCTGT TCCCGATGTC
  K
  GAGAAGTGCT GGTTTCACTG AGATC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45912957	mCV23956206	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss133371440	ENSMUSSNP3999255	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321851865	CHEV_6_89236038	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30269893					SNP	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89263026 () rs orientation: forward

Symbol	Name	Function Class
4930512J16Rik	RIKEN cDNA 4930512J16 gene	319 bp upstream
Rr379731	regulatory region 379731	25 bp downstream
Rr379732	regulatory region 379732	1445 bp upstream
Rr634092	regulatory region 634092	within coordinates
Rr634093	regulatory region 634093	67 bp proximal
Rr634094	regulatory region 634094	293 bp proximal
Rr634095	regulatory region 634095	779 bp proximal