rs30267980 SNP Detail

Summary

• ID
  rs30267980
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:28754326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAA GGAACTGGGG CATAGGGGTA
  M
  TGGAGGCCAT GTAGGACCCC TTTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45412866	mCV22688127	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss134715512	ENSMUSSNP1859456	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss320690850	CHEV_3_28599099	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30267980					SNP	C	A	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28754326 () rs orientation: forward

Symbol	Name	Function Class
Rr574618	regulatory region 574618	1986 bp distal
Rr574619	regulatory region 574619	1640 bp distal
Rr574620	regulatory region 574620	223 bp distal
Slc2a2	solute carrier family 2 (facilitated glucose transporter), member 2	Intron