rs30267771 SNP Detail

Summary

• ID
  rs30267771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72279486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCAAGTTC AGAGGGTTGT
  TTTGTTTGGT TTTGTTTTGT TTTTTGTTGT TTTCTTTTTG GAATGGAACA GAGAAAGTGA
  TAAATCAAGA CACCTTTCGC ATTTATCAGC GGAGACAGCA AGCAAATAAT TACAGGAAGC
  CAAGAAAACC TCTGCCCTGG GCCTCAGATG GTGCCTGGCT GTGTCATGAG TGGTGGGTGT
  R
  GGGTCTGTTG TACATCCCAA GTGAGTGCAC CTAATCGTCA CAAGGGTGTG AGGTGACACG
  CCGAGTAGGC AGTAAATGGC TCTTGAGAAG ATAATTTAGC TGCAGGTCTC TGACATGCCA
  GCTCTCCGCA GACAGAAGTC ATCCTTGTTG AATGTTTAAC GTGTGTATAG CTTTTTTCTG
  GGAACTTCAG TTCACATGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45912534	mCV22350936	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30267771					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72279486 () rs orientation: forward

Symbol	Name	Function Class
Rr632125	regulatory region 632125	within coordinates
Rr632126	regulatory region 632126	1618 bp proximal
Tssr57078	transcription start site region 57078	1801 bp upstream
Tssr57079	transcription start site region 57079	1817 bp upstream