rs30261216 SNP Detail

Summary

• ID
  rs30261216
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148590329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTAGCAAG CACTTACAGC
  AAATCCCCAG TCTCACAAAA CATCACCTCA GATGAAAACC CAGACTCGCT ATATTTATTG
  CTCTGAAAAG GCGATTAGCA TGGAAGAGAG CTCAGGTTTG AAGGAGGATT GCATAAACGT
  TATTGTTGCC TGTAAAGAGA GATCAGTAAA TGTGTACTAA TTAAATTAAA GGAAAGGGGG
  R
  AAAACTTCCT AGAGCTCTGA CATGGACACA GGGCCTCTTT ACGAAGACTG ATTGATCAAT
  AAAAAGGCTG AGAGGTTTGT ATGTCAAGGA GACTACACAG CAACAGAAAT CTATAATCAT
  GAAGTCTGAC AGAACCGTGG CTGCATTTTA ATGGATTCTC CAGGCTAACG TCTGAGCTTT
  GATATTTACC ACTACTCATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45411576	mCV23528011	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss136064819	ENSMUSSNP2747103	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30261216					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148590329 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Cpgi13929	CpG island 13929	1601 bp distal
Rr587220	regulatory region 587220	1474 bp proximal