rs30259919 SNP Detail

Summary

• ID
  rs30259919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37781620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTCTCCTT TGCCTTCCCC
  TCCCTTGCCT TTAGTTCCTG CCTATGTGGT GGTTGGAAGC AGGAGCTCAG TGTCCCAGCG
  AAAAAAATCA GAATAACACA AATCTGAAGA TGATGGCCTG CACATTGTAT AATATTTAAA
  TAAAGTTTGA GTGTTTAAAC CAACGTTTGA AGTTGAGCAA TATAAACCAA AATAGTCTGC
  Y
  AGCACACCAG TGCTACACAG GCACTAAGTG CTAAGCAAGG CTCTTAGGAG TCAGGTGGGA
  ATGGCCCCTA GGCAGGGGTG CAGCCCCGAC CTTACCCTAC AACAACAGCA GGTCCAGGGG
  GCTTCAGTTC CTGCCCCACC CCCAGATCTT CTCGTGCTAG GTGCCTCTTG CAAGACAAGC
  TGAACTGTGG GAACCTTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45409867	mCV24774877	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30259919					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37781620 () rs orientation: forward

Symbol	Name	Function Class
Gm36620	predicted gene, 36620	within coordinates
Rr575551	regulatory region 575551	379 bp distal
Rr575552	regulatory region 575552	659 bp proximal
Rr575553	regulatory region 575553	1673 bp proximal