rs30259202 SNP Detail

Summary

• ID
  rs30259202
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131741931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATATT TAGCTCATGA CTTTTATTTG
  R
  GTGATGGATT TTAATGTGCT GGTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45409250	mCV23621046	ABI	CRAMUS_MOUSE	f	SNP		G	A		G
ss46972743	NES10887898	PERLEGEN	MM_PANEL2	f	SNP	A			A			A	G	G		G
ss135907940	ENSMUSSNP4342150	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			G
ss320968381	CHEV_3_131699134	CHEVERUD	SCREENING_POP	f	SNP						A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30259202					SNP	A	G	A	A	G	A	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46972743	NES10887898	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131741931 () rs orientation: forward

Symbol	Name	Function Class
Gm29949	predicted gene, 29949	within coordinates
Gm64577	predicted gene, 64577	within coordinates
Rr585407	regulatory region 585407	1500 bp proximal