rs30258981 SNP Detail

Summary

• ID
  rs30258981
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52740092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAACAATG CAAACAGGAG
  GAACAAGGTA AGATGGAGTG TTTGGGGTAG AGGTGTGCAG CAGCCAAGTG CTGTCACAAT
  CAGCACACCC AAGCACCGTT TGTAATAGAT TGTTCCTGTA AATTAGCGGC TCTAGCTGAC
  AGAGCTATGA GTGCTTTTGG AAAGCTTCTC TATCAGTGTC AAAATCAAAG GCAGAGGGCG
  S
  GGAGAAGGCT GGGTTTAGCA GGGTGGCATT TTAGATGTGG ATTTATCCAA ATGAAGTGCA
  CACTTGCTTT TCCTGTCTAT CTTTGTAAGC CTTTGTTCTT TTTGTACTTT GAAGTATATC
  GGGGTTGGTA GTTTTAACAA AAGTCCCATG GAGAGGTCTT CTGGTAGGTA GACATACAAA
  GTTTGAGGTT TGGGGCCGAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45410757	mCV24465009	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss320765359	CHEV_3_52636593	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30258981					SNP	G	C	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52740092 () rs orientation: forward

Symbol	Name	Function Class
Rr576587	regulatory region 576587	344 bp distal