rs30258646 SNP Detail

Summary

• ID
  rs30258646
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70005355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGATCA CTACACCCCA
  GGCCTCCGGC CACTCCCGAA GCGCAGACTT CTATATAGCT TTGCGTTGCT GCTTGCTGTG
  CTACAGGTGA GTGTGGCGCG ACTGCGGTGC CCGAAGTGGG AAGCCGGCCA GGAAAGGAAA
  TGGCAAGGAA ATGTCCTGAG AGCCGGGCGC GCACGTGCGT GTGGTGGGAG AGGTCTGACA
  S
  TGCGGGGGGT GGGGGGGACA CGACTCCGCG GGGGTCCAGG TAGGCCTCAA CAGGGAAGCC
  TAGAAGGTTC GATGGTGGGG TGAGAGGGTT GGGGGGGTGG AGTGAGAGGG GGGGTGGAGT
  GAGGGGGGGT GGGGGACCCG AAGGTGAGGT GGGTCAGGAC TGGATGGGGA GGTGGGCGGA
  ACACTCTAGA CTGGGAGGAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss39166874	mCV22654191	ABI	CRAMUS_MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs30258646					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70005355 () rs orientation: forward

Symbol	Name	Function Class
4930480K23Rik	RIKEN cDNA 4930480K23 gene	793 bp downstream
Rr494753	regulatory region 494753	424 bp distal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Intron
Tssr126375	transcription start site region 126375	380 bp downstream
Tssr126376	transcription start site region 126376	353 bp downstream