rs30257666 SNP Detail

Summary

• ID
  rs30257666
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86989131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTACAGAT TCTCTTTGGT
  CAGAAGGTGG TAGATGAGAT GTGGCACGGA ATGTGTGTGT GCTCATGTGT GCATGCTGTG
  TGGGAAAAGA TAGCATGGCC CATGGAATTC AGTGCCGTTT GTGTTGTTCT ACACTAAGAT
  CTCCATCTAG GTCAGTAAGA CGTTTCCTTC GCCACCATTT CCAGGCCCCC ATCCCCTCAT
  R
  TCCTCTCACT TGTCTCTCCT TGGATGCTAA CATGGGACAA GCTCAAGCTC ACAAGGTCCC
  TGCTCCCCAC ACAGGGACAT CATCACAAAC CTGACACTCA AGGCACTGAA AATGGAAGAA
  GGAATCTGAT TGGTCAGGGG TGGGGTGGGG GGCAGTGAGG AGGAGACAAA ACCAAAATTT
  GTCTGGATAA AGTATCTACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45411835	mCV24905798	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135453685	ENSMUSSNP4755815	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs30257666					SNP	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86989131 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	mRNA-UTR
Rr579434	regulatory region 579434	494 bp proximal
Rr579435	regulatory region 579435	579 bp proximal