rs30255254 SNP Detail

Summary

• ID
  rs30255254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:116531267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGATTTTG TACTAGATTT
  AAAACCGTAA GCTAGGACGC TGGTGGGTGA GATTTTGGTG AATTCGAGTA GCACAACCTT
  CTGTAACCAT CCATGGCTGC ATTATATCAC GCAATGAGCC AGTTTCCCCA GCAACCTGGG
  CTTGCGTAAG TCAGCCCTGA CCACCCCTCC CCCAGCACCA TGCTGGATGT GCTGGACATT
  Y
  CTCTGGGAAA GTTACACAGC AGATATTGCT TCATTTATCT CCCTGGCCAG CCATTTCCTC
  ATAGCACATA AAATCATGTA TGGTAACACA GACTGGCGTG AGGAACCAAA GCTGGCCTGC
  TGGGTTAACT TGTCCTGGAC AGCTTGTCAT TTGGGCTTCA CTATGTTGTT TAAGATAGTC
  TCAAATCCCT GAGCTTAAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45410008	mCV24029384	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss135671457	ENSMUSSNP764865	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30255254					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116531267 () rs orientation: forward

Symbol	Name	Function Class
Gm54181	predicted gene, 54181	Intron
Gm64822	predicted gene, 64822	within coordinates
Rr583772	regulatory region 583772	214 bp distal
Rr583773	regulatory region 583773	within coordinates
Rr583774	regulatory region 583774	112 bp distal