rs30254203 SNP Detail

Summary

• ID
  rs30254203
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:65734713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CGGGACAGTG ACACGTTGGG AAGAAATATG GAGACATTGC TTTGTTTTAC TTAATTAACG
  GTGACAAGAT ATTAAAATTG GATTGTTGAT TTAGAACAGG AAATCCTAAA TAATGTGTGT
  TTTAGGCTAT TCTCCCTCAT CTTGAAAAAC TGGCTCTCGA AGACCATTAT TCTGAGGGAT
  TTTGTTATTT CTATGACTTT TATTCCGAGA AGCTTATAAT AGTTGCTTTT ATTGTGTTTG
  CAAGCATGAG TATATAATTT TAATACTTCT TCCTGACATT CCTAAAATTT TATTTAGTTT
  Y
  TCATTCCTAG TTTACCAAAA AGCCATTTCC ATTGTTAATC TGCAGTGTTG GGCTGACTGG
  ATGGATGGAG GCGGGGCACA TCTTTTGCTA ACTCTTTACT CATCTGTCTA GTTTCCACAT
  CTTGTCTACT GAACCTCCAT CACTTCAGGT GCCCACCCCT TCCTCCCCGA CGCAGCTGGC
  TGGACACCCA CTTTCCTGAG TTCTCTCTGG TTAGAGCTGG CACAAACTGT GTCCTCTATC
  ATCTTGTGAC TGGGCAGGAC CTCGTGTAAA CCATGAGCAA GACCATCTGT GCCTCTTCTT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45412305	mCV23205553	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30254203					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65734713 () rs orientation: forward

Symbol	Name	Function Class
Gm37359	predicted gene, 37359	1824 bp downstream
Lekr1	leucine, glutamate and lysine rich 1	Intron
Rr577737	regulatory region 577737	720 bp proximal
Rr577738	regulatory region 577738	1960 bp proximal