rs30253610 SNP Detail

Summary

• ID
  rs30253610
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21990302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGT CTGAATGACT GAGCAGAGGA
  S
  AGGGGGGGTG GGGCGCCATC CATCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45410192	mCV24792858	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs30253610					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21990302 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13011	CpG island 13011	within coordinates
Gm31813	predicted gene, 31813	within coordinates
Gm64857	predicted gene, 64857	122 bp upstream
Gm64860	predicted gene, 64860	98 bp upstream
Rr367415	regulatory region 367415	within coordinates
Rr574165	regulatory region 574165	109 bp distal
Rr574166	regulatory region 574166	within coordinates
Rr574167	regulatory region 574167	133 bp proximal
Rr574168	regulatory region 574168	1587 bp proximal
Tssr32751	transcription start site region 32751	94 bp upstream