rs30237221 SNP Detail

Summary

• ID
  rs30237221
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121359480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTATTCG CCTTGCTTTG
  GGGTTTGGGG ACTTGAAAAT GAACCTTAGA TGCTTCTGAA AATGCTTGTG ACTGCAGGAT
  TCATATGCAT GCCCTTTTAC TCTAACACAA AGTTTAGTGC AGGTCACCCA GCTAAGGAGG
  AAAAGGAGGA GATCCACAGT TCCACAGGGC TGCCACACAT GACAGTCTCG GCCAGCATCA
  Y
  TCCAGCCACT CCACTGGGCA CGAATGTTCT CTGTGCAAGC AATGAGGACC TATGTTTTGG
  CTCATGGAAA AACAGGTATA GCTAGTCACA CCTGTAATCC TAGCACCAGG GGTGGATGTC
  TAGAGTTAGA CAGATCCTGG GAGCTTGCTG CCTAGCCTGT CTGTCTGAAT GGTAAGTGCA
  ATGAGAGACC CACGGTCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46927812	NES10668121	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs30237221					SNP	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46927812	NES10668121	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121359480 () rs orientation: forward

Symbol	Name	Function Class
Gm33547	predicted gene, 33547	within coordinates
Rr584118	regulatory region 584118	1698 bp proximal