rs30235193 SNP Detail

Summary

• ID
  rs30235193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121359223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACATG CTTCTTCAAG GCAGTCGTCA
  Y
  CTGCTGGCAC TGAGCTAGCC TTCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
ss46927794	NES10668115	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C		C
ss320903902	CHEV_3_121268492	CHEVERUD	SCREENING_POP	f	SNP						T		T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
rs30235193					SNP	C	C	C	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46927794	NES10668115	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121359223 () rs orientation: forward

Symbol	Name	Function Class
Gm33547	predicted gene, 33547	within coordinates
Rr584118	regulatory region 584118	1955 bp proximal