rs30227974 SNP Detail

Summary

• ID
  rs30227974
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:120019249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACCGAAGA CCCTCTTTAA TTAATTAGTG GATCAATTAA
  TCAATGAAAC AACAAGGCTG TTGAGTAGTT GTTCATAGAC CATGCCAATT TCAGAAGCTT
  Y
  TTCTGACCCA CACATCGCAT TAGGATAGCT AAGACTGTAG AGCATTTAGG AAGAAAACCA
  AGCTGATCAT TACTAAAACA AAACTCTACC AATACTAAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45908826	mCV24680867	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss133594594	ENSMUSSNP906956	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321929677	CHEV_6_119992306	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30227974					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:120019249 () rs orientation: forward

Symbol	Name	Function Class
Gm66353	predicted gene, 66353	958 bp downstream
Rr637763	regulatory region 637763	443 bp proximal