rs30227194 SNP Detail

Summary

• ID
  rs30227194
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72245957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATGAGGACCC GAGTGAGCCA CAATCATCTA AAAGCCAGGC GTGGATGCCT GTGTCTGGGA
  CCCTGCCCTG AGGAATAGGG GTAGAGATGG GCAGACCCTG GGACCATTGA CCAGAAAGCT
  TAGCTGAATC AGGGAGCTAA GTGTCAGGGA GAGGTCCTGT TTCAAAAAAG GTGGAGAGTG
  GCAAAGTAAG ACATCAGATG TCAACTTATG ACCTATATAC CTGACCCGCA TCTGCATACA
  GCCACAGGAC ATCTATCACA CACACATAGA CACACACACA CACACACACA CAGAGAGAGA
  S
  AGACAGACAG AGACACAGAG ACACAAAAAG AAAGAGAGAC ACAGAAAGAG AGACAGAGAC
  AGACAGAGAC ACAGAGAGAC AGAGACAGAG GAGTACCAGT GCTGGGAATG TAGGTGAGTT
  GGTGGAGGGC TCGCTTAGCA TGCATGAAGG TCTCGGCTTG CTCTCCAGCA TAACAGATCT
  GGGGACAGTG GTGAATGACA GTTATCCCCA CACTTTGGAG GTGGTGGCAG AATTAGGAGT
  TCAAGATCCT TCTTAGCTAC ATAGTAAGTT CAAGACCAGC CGGAGATACA TGAAACTCTA
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45907481	mCV23347981	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss133283433	ENSMUSSNP6359106	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30227194					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72245957 () rs orientation: forward

Symbol	Name	Function Class
Rr632116	regulatory region 632116	1503 bp distal
Rr632117	regulatory region 632117	1878 bp proximal