rs30225070 SNP Detail

Summary

• ID
  rs30225070
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95493634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGATTAA AATCTTTATT
  TCCTTTTCAT TTCTCCAATT TTTATTTTAC TATTTCAGTG ATATAATCTT ACAATTATTT
  TTCTTCTATC TAAAACAACT CAAATATCTT ACCTTTTGTG AGGATATACT TTTAGATAAG
  TTGTATGTCA ACAATAAATT ATACTCTACT TTAAAATTAT CCCAGGCAAA TTTCTGAGTT
  Y
  GAGGCCAGCC TGGTCTACAG AGTGAGTTCC AGGACAGCCA GGGCTACACA GAGAAACCCT
  GTCTCAAAAA ACAAAAACAA AAACAAAAAC AAACAAACAA ACAAACAAAT AAATAAAATT
  ATCCCAGGTA GCATATCTTA GTAGAAAATA CCTATGCTGG GCTGGAGATG TCATTCAGTC
  AGTAGAGTGC CTGCTTAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45408852	mCV23591591	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30225070					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95493634 () rs orientation: forward

Symbol	Name	Function Class
Gm40097	predicted gene, 40097	within coordinates
Hormad1	HORMA domain containing 1	Intron
Rr580975	regulatory region 580975	1618 bp proximal
Rr580976	regulatory region 580976	1936 bp proximal