rs30224864 SNP Detail

Summary

• ID
  rs30224864
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17944302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCGAGTCA GGTGGTATAG
  CACATGACAG GCACAATAAA CTTTGATCTG TGCTGGAGGA GAATGGTTTC AGATGAGAAG
  GACCAGGGAA GGCTTAGAAG TATAATGTTT GAGCTGAACA AACAAATTAT CTAATGCAAT
  TCTTTAATCT AATAGATGAG GAAATCAGAG CTTTTGGTCT GCTGGGGCTG AGACTCTGGA
  Y
  TTCGATAAGT TCTGAAGGAG GGGCTTGAGA GAAGTAAGCA GTGTGAAGTG GAAATGGCCC
  AAAGCCAGTT GTTGCTAGAA ACCTCGAGTT GTAGGAAATG AAGCCAAGGA ATGCAAGATA
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT TATACAAGGT
  CTCTCCATAG CTCACACTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45907655	mCV23798755	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133025460	ENSMUSSNP6128443	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30224864					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17944302 () rs orientation: forward

Symbol	Name	Function Class
Rr626887	regulatory region 626887	within coordinates
St7	suppression of tumorigenicity 7	1280 bp downstream